Experiment Matrix

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BIOSAMPLE

	ASSAY
2045 results Clear Filters	ChIP-seq	total RNA-seq	ATAC-seq	DNase-seq	single cell RNA-seq	snATAC-seq	WGBS	pCHi-C	Hi-C	small RNA-seq	RRBS	FAIRE-seq	RNA microarray	MeRIP-seq
tissue
islet of Langerhans	58	298	68	1		7		4	3		1	1		2
liver	102	167	20	2			3	1	1	1	1
kidney	21	49	75	13	59	6			1		1	1
heart left ventricle	29	3	2	3	18		4	1	1		1
left cardiac atrium	40			1	18
coronary artery	3	1	36	2
body of pancreas	26	3	4	4			2			2
heart	12	4		18	1		1		1	1
brain	17	1	1	14							1
heart right ventricle	11	1		1	17		2	1	1
subcutaneous abdominal adipose tissue	31						3
tibial nerve	24	5	1	2
skeletal muscle tissue	19	1	1		1	1				1	4
pancreas	13	2		2		4	2	1	1		1	1
right cardiac atrium	5				18		1	1
tibial artery	18	1	1	2
retina		3	15	3
aorta	11	1			4		2	1	1
layer of hippocampus	20
lung					9	10		1
muscle of leg	6			13			1
muscle of arm				17
spleen	12		1	1			2	1
ascending aorta	13	2		1
right lobe of liver	7	3	1	2			1			2
caudate nucleus	13	1		1
substantia nigra	14	1
temporal lobe	13	1								1
thoracic aorta	12	2	1
angular gyrus	14
endocrine pancreas	14
pigmented layer of retina		2	12
right atrium auricular region	7	3	1	2
cingulate gyrus	12
middle frontal area 46	12
omental fat pad	3	5	1	2						1
white adipose tissue	12
renal cortex interstitium				11
germinal matrix	10
renal pelvis				10
right kidney				10
subcutaneous adipose tissue	2	5	1							1			1
adipose tissue	1	1	3				3	1
left kidney				9
cerebellum (Hemisphere)	2	1	1	1						1
frontal cortex		2		2						1		1
gastrocnemius medialis		1							4
psoas muscle		2						1	2
aortic valve					4
left renal cortex interstitium				4
left renal pelvis				4
pulmonary valve					4
right renal pelvis				4
superior frontal gyrus	4
tricuspid valve					4
Ammon's horn		1		1				1
cardiac atrium		1			2
cardiac ventricle		1			2
middle frontal gyrus	2			1
middle temporal gyrus	3
mitral valve					3
occipital lobe		1		1						1
putamen	1	1		1
right renal cortex interstitium				3
acetabular part of hip bone		1	1
amygdala	1	1
anterior cingulate gyrus	2
central medial thalamic nucleus	2
cerebellum		2
diencephalon		1								1
hypothalamus	1	1
ilium		1	1
interventricular septum					2
ischium		1	1
metanephros		1								1
nucleus accumbens	1	1
parietal lobe		1								1
pons	1			1
posterior cingulate gyrus	2
precuneus cortex	2
pubis		1	1
pulmonary artery					2
superior parietal cortex	2
supramarginal gyrus	2
thymus								2
C1 segment of cervical spinal cord		1
adipose tissue(adipose white tissue)			1
adrenal gland								1
agranular insular cortex	1
anterior cingulate cortex		1
arcuate nucleus of hypothalamus	1
bed nucleus of stria terminalis	1
bladder (urinary bladder)								1
body of caudate nucleus	1
brodmann area 43	1
cerebellar cortex				1
claustrum of brain	1
cuneus	1
dentate nucleus	1
dorsal lateral geniculate nucleus	1
dorsal plus ventral thalamus	1
dorsolateral prefrontal cortex								1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))		1
esophagus								1
external globus pallidus	1
fastigial nucleus	1
forelimb muscle				1
frontal pole	1
gastric (mucosa of stomach)								1
globus pallidus				1
gyrus rectus	1
head of caudate nucleus	1
hindlimb muscle				1
hippocampal gyrus	1
inferior frontal gyrus	1
inferior parietal cortex				1
inferior temporal gyrus	1
insular gyrus	1
kidney interstitium													1
lateral hypothalamic area	1
lateral occipital gyrus	1
lateral septal nucleus	1
left ventricle myocardium		1
lingual gyrus	1
locus coeruleus	1
mammillary body	1
medial dorsal nucleus of thalamus	1
medial geniculate nucleus	1
medial globus pallidus	1
medial segment of precentral gyrus	1
medulla oblongata				1
midbrain				1
midbrain tectum	1
myelencephalon	1
occipital pole	1
olivary body	1
orbital gyrus	1
ovary								1
paraterminal gyrus	1
pericardium											1
pineal body	1
piriform cortex	1
pituitary gland	1
planum polare	1
planum temporale	1
postcentral gyrus	1
posterior cingulate cortex			1
primary motor cortex	1
primary somatosensory cortex	1
pulvinar nucleus	1
raphe nuclei	1
red nucleus	1
renal glomerulus													1
secondary auditory cortex	1
sigmoid colon								1
small intestine								1
subiculum	1
substantia nigra pars reticulata	1
subthalamic nucleus	1
superior occipital gyrus	1
superior temporal gyrus				1
suprachiasmatic nucleus	1
temporal pole	1
transverse temporal gyrus	1
uncus of parahippocampal gyrus	1
ventral anterior nucleus of thalamus	1
white matter	1

Experiment Matrix

Assay

Assay category

Target of assay

Date released

Available data

Organism

Biosample type

Organ

Project

Genome assembly (visualization)

Lab

Audit category:

Audit category:

Audit category:

award.project!

target.investigated_as!

month_released!

2045 results