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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
ChIP-seq
Assay category
65
DNA binding
Target of assay
286
transcription factor
119
histone
119
histone modification
92
control
66
recombinant protein
65
broad histone mark
54
narrow histone mark
41
RNA binding protein
18
chromatin remodeller
2
other context
2
other post-translational modification
Date released
109
August, 2017
76
May, 2021
58
May, 2019
55
October, 2019
50
November, 2017
37
April, 2019
19
October, 2018
17
September, 2018
15
December, 2017
10
October, 2017
9
August, 2021
8
February, 2018
8
June, 2019
6
November, 2019
4
January, 2019
Available data
61
bam
60
bed narrowPeak
60
bigWig
55
bigBed narrowPeak
41
tagAlign
23
fastq
10
bed broadPeak
8
bigBed broadPeak
5
bed bed3+
Organism
65
Homo sapiens
Biosample type
45
tissue
11
in vitro differentiated cells
8
cell line
1
stem cell
Organ
42
brain
18
liver
7
epithelium
1
embryo
Project
65
AMP
Genome assembly (visualization)
60
GRCh38
25
hg19
Lab
65
AMP-T2D consortium
Audit category:
11
inconsistent control read length
award.project!
HPAP
BIOSAMPLE
ASSAY
65 results
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ChIP-seq
tissue
layer of hippocampus
12
caudate nucleus
8
substantia nigra
8
cingulate gyrus
7
middle frontal area 46
7
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in vitro differentiated cells
hepatocyte
7
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
cell line
HepG2
8
stem cell
hESC
1
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