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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
DNase-seq
8
ATAC-seq
4
Hi-C
1
WGBS
Assay category
DNA binding
44
DNA accessibility
Transcription
4
3D chromatin structure
1
DNA methylation
Date released
32
June, 2019
6
February, 2021
6
October, 2019
5
July, 2019
Available data
45
bam
44
bed narrowPeak
39
bigWig
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
36
bigBed narrowPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
49
Homo sapiens
Biosample type
49
tissue
Organ
249
pancreas
194
epithelium
177
kidney
97
bone element
93
heart
67
vasculature
64
blood vessel
50
connective tissue
49
artery
49
limb
48
musculature of body
46
liver
44
brain
37
eye
18
ureter
17
adipose tissue
12
skeleton
9
blood
9
bodily fluid
5
spleen
5
vein
3
nerve
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
49
AMP
Genome assembly (visualization)
45
GRCh38
44
hg19
Lab
49
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
award.project!
LungMap
assay_slims!
Transcription
DNA binding
BIOSAMPLE
ASSAY
49 results
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DNase-seq
ATAC-seq
Hi-C
WGBS
tissue
muscle of arm
17
muscle of leg
13
1
gastrocnemius medialis
4
tibial artery
2
1
tibial nerve
2
1
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