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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
446
ChIP-seq
Assay category
446
DNA binding
Target of assay
249
transcription factor
123
histone
123
histone modification
71
control
70
broad histone mark
66
recombinant protein
53
narrow histone mark
42
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
715
February, 2021
406
November, 2017
405
August, 2017
399
May, 2021
341
May, 2020
319
August, 2021
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
94
December, 2017
93
July, 2019
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
392
bam
374
bigWig
353
bed narrowPeak
324
fastq
312
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
446
Homo sapiens
Biosample type
315
cell line
122
tissue
9
primary cell
Organ
315
liver
91
brain
40
heart
6
epithelium
6
vasculature
3
blood vessel
Project
446
AMP
Genome assembly (visualization)
320
GRCh38
281
hg19
Lab
406
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
award.project!
LungMap
assay_title!
RRBS
month_released!
October, 2019
BIOSAMPLE
ASSAY
446 results
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Clear Filters
ChIP-seq
cell line
HepG2
315
tissue
left cardiac atrium
40
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
+ See 2 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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