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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
237
ChIP-seq
Assay category
237
DNA binding
Target of assay
237
histone
237
histone modification
135
narrow histone mark
102
broad histone mark
9
transcription factor
Date released
85
May, 2021
54
November, 2017
40
October, 2019
19
May, 2020
17
August, 2017
16
August, 2021
6
October, 2017
Available data
800
bigWig
786
bed narrowPeak
766
bam
390
bigBed narrowPeak
237
tagAlign
225
fastq
40
bed broadPeak
26
bigBed broadPeak
25
bed bed3+
1
tagAlign bed3+
Organism
231
Homo sapiens
Biosample type
116
tissue
98
primary cell
14
in vitro differentiated cells
9
cell line
Organ
82
brain
31
liver
7
pancreas
4
epithelium
1
pituitary gland
Project
153
AMP
84
T1D
Genome assembly (visualization)
237
GRCh38
227
hg19
Lab
153
AMP-T2D consortium
84
Kyle Gaulton, UCSD
Audit category:
3
missing controlled_by
Audit category:
9
inconsistent control read length
2
inconsistent assembly
award.project!
LungMap
BIOSAMPLE
ASSAY
237 results
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Clear Filters
ChIP-seq
tissue
liver
19
caudate nucleus
12
substantia nigra
12
layer of hippocampus
11
brain
6
+ See 40 more…
primary cell
monocyte
84
skeletal muscle myoblast
11
hepatocyte
3
in vitro differentiated cells
neural progenitor cell
13
pancreatic PP cell
1
cell line
HepG2
9
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