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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
snATAC-seq
6
single cell RNA-seq
5
total RNA-seq
2
RNA microarray
1
pCHi-C
Assay category
16
DNA accessibility
11
Transcription
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
12
tsv
8
bam
8
bigWig
4
fastq
1
bedpe bed3+
Organism
30
Homo sapiens
Biosample type
16
primary cell
11
tissue
3
in vitro differentiated cells
Organ
11
pancreas
9
epithelium
8
blood
8
bodily fluid
5
liver
3
kidney
1
adipose tissue
1
connective tissue
Project
16
T1D
14
AMP
Genome assembly (visualization)
8
GRCh38
8
hg19
Lab
16
Kyle Gaulton, UCSD
14
AMP-T2D consortium
Audit category:
4
audit script error
2
inconsistent ontology term
award.project!
LungMap
BIOSAMPLE
ASSAY
30 results
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Clear Filters
snATAC-seq
single cell RNA-seq
total RNA-seq
RNA microarray
pCHi-C
primary cell
peripheral blood mononuclear cell
8
hepatocyte
5
pancreatic alpha cell
2
pancreatic acinar cell
1
tissue
islet of Langerhans
4
pancreas
4
kidney
1
kidney interstitium
1
renal glomerulus
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
white fat cell
1
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