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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
5
total RNA-seq
3
single cell RNA-seq
2
RNA microarray
1
Hi-C
Assay category
32
DNA binding
8
Transcription
1
3D chromatin structure
Target of assay
28
transcription factor
4
control
2
RNA binding protein
chromatin remodeller
Date released
715
February, 2021
408
August, 2017
399
May, 2021
391
November, 2017
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
91
December, 2017
81
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
33
December, 2018
25
February, 2020
24
January, 2019
23
October, 2017
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
37
bam
33
bigWig
33
fastq
28
bed narrowPeak
28
bigBed narrowPeak
9
tsv
Organism
43
Homo sapiens
Biosample type
26
cell line
10
tissue
5
primary cell
2
in vitro differentiated cells
Organ
25
blood
25
bodily fluid
7
spleen
6
epithelium
6
liver
3
kidney
Project
43
AMP
Genome assembly (visualization)
33
GRCh38
33
hg19
Lab
43
AMP-T2D consortium
Audit category:
4
audit script error
2
inconsistent ontology term
award.project!
LungMap
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
43 results
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Clear Filters
ChIP-seq
total RNA-seq
single cell RNA-seq
RNA microarray
Hi-C
cell line
GM12878
25
HepG2
1
tissue
spleen
7
kidney
1
kidney interstitium
1
renal glomerulus
1
primary cell
hepatocyte
5
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
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