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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
5
total RNA-seq
3
ATAC-seq
3
single cell RNA-seq
2
RNA microarray
Assay category
15
DNA binding
8
Transcription
3
DNA accessibility
Target of assay
12
histone
12
histone modification
10
broad histone mark
3
control
2
narrow histone mark
Date released
683
February, 2021
406
November, 2017
341
May, 2020
338
May, 2021
315
August, 2021
296
October, 2019
223
August, 2017
214
June, 2019
149
February, 2023
118
May, 2019
102
July, 2019
96
May, 2022
94
December, 2017
81
November, 2018
80
April, 2019
50
March, 2020
47
September, 2023
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
February, 2020
23
October, 2018
18
October, 2017
15
May, 2023
11
July, 2018
10
April, 2018
10
December, 2019
8
January, 2018
8
January, 2021
6
November, 2019
6
November, 2020
5
March, 2023
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
16
bam
14
bigWig
14
tagAlign
12
fastq
9
tsv
8
bed narrowPeak
6
bigBed narrowPeak
3
bed broadPeak
Organism
28
Homo sapiens
Biosample type
21
tissue
5
primary cell
2
in vitro differentiated cells
Organ
16
brain
6
epithelium
5
liver
pancreas
3
kidney
1
adipose tissue
1
connective tissue
1
spleen
Project
28
AMP
Genome assembly (visualization)
14
GRCh38
13
hg19
Lab
28
AMP-T2D consortium
Audit category:
4
audit script error
2
inconsistent ontology term
Audit category:
4
missing controlled_by
award.project!
LungMap
organ_slims!
pancreas
BIOSAMPLE
ASSAY
28 results
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ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
RNA microarray
tissue
brain
15
cerebellum (Hemisphere)
1
kidney
1
kidney interstitium
1
omental fat pad
1
+ See 2 more…
primary cell
hepatocyte
5
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
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