Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
79
ChIP-seq
10
MeRIP-seq
4
total RNA-seq
1
ATAC-seq
Assay category
79
DNA binding
4
Transcription
1
DNA accessibility
Target of assay
42
transcription factor
21
control
21
histone
21
histone modification
11
narrow histone mark
10
broad histone mark
5
nucleotide modification
4
RNA binding protein
3
chromatin remodeller
Date released
713
February, 2021
406
November, 2017
397
May, 2021
378
August, 2017
341
May, 2020
314
August, 2021
306
October, 2019
201
February, 2023
199
May, 2022
168
July, 2018
120
May, 2019
July, 2019
80
April, 2019
79
December, 2017
79
November, 2018
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
31
June, 2019
30
January, 2019
25
February, 2020
23
October, 2017
16
January, 2021
15
May, 2023
15
November, 2020
10
December, 2019
9
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
100
bam
94
fastq
77
bigWig
74
bed narrowPeak
51
bigBed narrowPeak
bed bed3+
4
tsv
1
bed broadPeak
1
bigBed broadPeak
Organism
94
Homo sapiens
Biosample type
52
tissue
31
in vitro differentiated cells
6
cell line
5
primary cell
Organ
63
liver
25
epithelium
10
embryo
10
pancreas
5
connective tissue
Project
94
AMP
Genome assembly (visualization)
67
GRCh38
67
hg19
Lab
84
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
27
inconsistent control
10
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
5
inconsistent control read length
award.project!
LungMap
month_released!
July, 2019
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
94 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
MeRIP-seq
total RNA-seq
ATAC-seq
tissue
liver
38
right lobe of liver
10
islet of Langerhans
4
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
6
Hepatic endoderm
4
Posterior foregut
2
definitive endodermal cell
2
+ See 1 more…
cell line
EndoC_BH1
6
primary cell
osteoblast
4
1
See all biosamples
Download