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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ChIP-seq
20
total RNA-seq
4
pCHi-C
3
DNase-seq
1
ATAC-seq
Assay category
23
DNA binding
20
Transcription
4
DNA accessibility
Target of assay
10
histone
10
histone modification
7
narrow histone mark
7
recombinant protein
7
transcription factor
6
control
3
broad histone mark
Date released
130
August, 2021
88
June, 2019
51
October, 2019
47
September, 2023
31
February, 2023
23
April, 2019
14
May, 2023
12
July, 2019
8
February, 2021
5
May, 2019
3
December, 2019
2
March, 2020
1
February, 2020
Available data
28
bam
22
bigWig
16
bed narrowPeak
6
tsv
1
bigBed narrowPeak
Organism
51
Homo sapiens
Biosample type
25
tissue
15
cell line
11
primary cell
Organ
86
brain
69
limb
47
blood vessel
47
vasculature
42
nerve
35
epithelium
30
kidney
26
artery
21
eye
21
vein
18
pancreas
8
heart
7
liver
4
connective tissue
4
gonad
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
51
AMP
Genome assembly (visualization)
22
GRCh38
22
hg19
Lab
51
AMP-T2D consortium
Audit category:
13
inconsistent ontology term
award.project!
LungMap
BIOSAMPLE
ASSAY
51 results
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Clear Filters
ChIP-seq
total RNA-seq
pCHi-C
DNase-seq
ATAC-seq
tissue
islet of Langerhans
2
14
4
1
kidney
4
cell line
RCC 7860 HIF1a re-expression
4
1
RCC 7860 HIF2a over-expression
3
1
RCC 7860 vector
3
1
glomerular visceral epithelial cell
1
1
primary cell
epithelial cell of proximal tubule
7
kidney glomerular epithelial cell
1
1
kidney tubule cell
1
1
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