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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
63
ATAC-seq
21
total RNA-seq
4
pCHi-C
2
ChIP-seq
2
single cell RNA-seq
1
RRBS
Assay category
63
DNA accessibility
23
Transcription
2
DNA binding
1
DNA methylation
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
66
February, 2023
21
October, 2019
3
February, 2020
2
August, 2021
1
July, 2019
Available data
bam
107
bed narrowPeak
91
bigWig
63
tsv
31
bigBed narrowPeak
8
bed bed3+
8
bed broadPeak
8
bigBed broadPeak
6
tagAlign
1
bed bedMethyl
1
bigBed bedMethyl
Organism
93
Homo sapiens
Biosample type
92
tissue
1
primary cell
Organ
257
pancreas
210
kidney
207
epithelium
182
heart
110
liver
93
bone element
91
connective tissue
54
eye
51
vasculature
50
blood vessel
49
adipose tissue
43
brain
39
artery
39
musculature of body
9
blood
9
bodily fluid
8
limb
8
skeleton
5
gonad
5
ovary
2
intestine
2
thymus
2
vein
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
large intestine
1
lung
1
lymph node
1
mammary gland
1
nerve
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
93
AMP
Genome assembly (visualization)
35
GRCh38
28
hg19
Lab
93
AMP-T2D consortium
award.project!
LungMap
files.file_type!
bam
BIOSAMPLE
ASSAY
93 results
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Clear Filters
ATAC-seq
total RNA-seq
pCHi-C
ChIP-seq
single cell RNA-seq
RRBS
tissue
coronary artery
35
1
islet of Langerhans
1
14
4
2
retina
15
3
pigmented layer of retina
12
2
pulmonary artery
2
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primary cell
retinal pigment epithelial cell
1
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