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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
ChIP-seq
23
ATAC-seq
14
total RNA-seq
Assay category
40
DNA binding
23
DNA accessibility
14
Transcription
Target of assay
50
histone
50
histone modification
broad histone mark
20
narrow histone mark
12
transcription factor
8
control
5
RNA binding protein
Date released
53
May, 2021
24
May, 2022
Available data
28
bed narrowPeak
24
bam
24
fastq
20
bigWig
6
txt
2
bed bed3+
Organism
77
Homo sapiens
Biosample type
37
in vitro differentiated cells
25
tissue
15
primary cell
Organ
25
pancreas
Project
T1D
77
AMP
Genome assembly (visualization)
38
hg19
Lab
3498
AMP-T2D consortium
324
Klaus Kaestner, Upenn
142
Katalin Susztak, Upenn
77
Kyle Gaulton, UCSD
47
KPMP
40
Karen Mohlke, UNC
37
Bing Ren, UCSD
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
award.project!
T1D
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
77 results
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ChIP-seq
ATAC-seq
total RNA-seq
in vitro differentiated cells
embryonic stem cell
27
5
5
tissue
islet of Langerhans
18
6
pancreas
1
primary cell
CD8-positive, alpha-beta T cell
13
2
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