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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
143
total RNA-seq
83
ATAC-seq
27
ChIP-seq
1
snATAC-seq
Assay category
143
Transcription
84
DNA accessibility
27
DNA binding
Target of assay
27
histone
27
histone modification
27
narrow histone mark
Date released
574
February, 2021
281
November, 2017
276
August, 2017
217
October, 2019
215
May, 2020
187
June, 2019
180
May, 2021
164
July, 2018
97
May, 2019
91
July, 2019
77
December, 2017
72
September, 2018
71
November, 2018
65
April, 2019
60
August, 2021
59
November, 2019
49
April, 2018
47
October, 2018
45
February, 2023
39
May, 2022
31
February, 2018
30
December, 2018
27
March, 2020
26
January, 2019
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
235
bigWig
233
bam
143
tsv
65
bed narrowPeak
27
tagAlign
18
fastq
1
bed bed3+
1
txt
Organism
254
Homo sapiens
Biosample type
209
tissue
45
primary cell
Organ
190
liver
18
pancreas
1
musculature of body
Project
254
AMP
T1D
Genome assembly (visualization)
254
hg19
162
GRCh38
Lab
216
AMP-T2D consortium
20
Karen Mohlke, UNC
18
Kyle Gaulton, UCSD
Audit category:
4
inconsistent ontology term
1
audit script error
award.project!
T1D
BIOSAMPLE
ASSAY
254 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
snATAC-seq
tissue
liver
143
20
27
islet of Langerhans
18
skeletal muscle tissue
1
primary cell
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
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