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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
71
ChIP-seq
DNase-seq
36
ATAC-seq
26
total RNA-seq
4
Hi-C
4
pCHi-C
1
RRBS
1
WGBS
Assay category
71
DNA binding
36
DNA accessibility
26
Transcription
4
3D chromatin structure
2
DNA methylation
Target of assay
52
histone
52
histone modification
34
broad histone mark
18
control
18
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
86
October, 2019
31
February, 2023
7
May, 2019
6
February, 2021
6
July, 2019
4
February, 2020
3
June, 2019
Available data
85
bed narrowPeak
81
bam
57
bigWig
50
bigBed narrowPeak
12
tsv
2
bed bedMethyl
2
bigBed bedMethyl
Organism
143
Homo sapiens
Biosample type
139
tissue
4
primary cell
Organ
904
pancreas
785
liver
674
connective tissue
501
epithelium
489
adipose tissue
363
heart
273
kidney
254
brain
225
vasculature
221
blood vessel
158
bone element
137
artery
86
limb
63
musculature of body
61
blood
61
bodily fluid
57
eye
41
nerve
37
embryo
24
spleen
20
lung
20
vein
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
143
AMP
Genome assembly (visualization)
90
hg19
62
GRCh38
Lab
143
AMP-T2D consortium
award.project!
T1D
assay_title!
DNase-seq
BIOSAMPLE
ASSAY
143 results
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ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
pCHi-C
RRBS
WGBS
tissue
tibial nerve
35
1
5
tibial artery
23
1
1
islet of Langerhans
3
1
14
4
retina
15
3
pigmented layer of retina
12
2
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primary cell
retinal pigment epithelial cell
3
1
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