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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
12
ATAC-seq
7
total RNA-seq
4
Hi-C
Assay category
18
DNA binding
12
DNA accessibility
7
Transcription
4
3D chromatin structure
Target of assay
17
control
1
histone
1
histone modification
1
narrow histone mark
Date released
17
October, 2019
8
February, 2021
8
February, 2023
4
July, 2019
3
February, 2020
1
May, 2019
Available data
116
bam
94
bed narrowPeak
bigWig
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
4
bed bed3
4
txt
1
bed bedMethyl
1
bigBed bedMethyl
Organism
41
Homo sapiens
Biosample type
41
tissue
Organ
295
pancreas
223
epithelium
223
kidney
169
heart
169
liver
113
connective tissue
100
bone element
81
vasculature
80
blood vessel
66
adipose tissue
64
brain
56
artery
55
eye
31
limb
28
musculature of body
20
lung
16
skeleton
12
nerve
9
spleen
8
embryo
7
vein
6
blood
6
bodily fluid
5
gonad
5
ovary
2
intestine
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
41
AMP
Genome assembly (visualization)
12
hg19
8
GRCh38
Lab
41
AMP-T2D consortium
award.project!
T1D
files.file_type!
bigWig
BIOSAMPLE
ASSAY
41 results
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ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
tissue
tibial nerve
11
1
tibial artery
5
1
gastrocnemius medialis
1
4
acetabular part of hip bone
1
1
ilium
1
1
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