Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
DNase-seq
8
ChIP-seq
Assay category
34
DNA accessibility
8
DNA binding
Target of assay
5
histone
5
histone modification
3
RNA binding protein
3
narrow histone mark
3
transcription factor
2
broad histone mark
Date released
30
June, 2019
6
November, 2017
4
October, 2019
2
November, 2018
Available data
263
bam
237
bigWig
216
bed narrowPeak
140
bigBed narrowPeak
118
tagAlign
51
bed broadPeak
42
bigBed broadPeak
37
bed bed3+
26
tsv
21
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
2
hic
1
bed bed3
1
bedpe bed3+
1
tagAlign bed3+
1
tar
Organism
42
Homo sapiens
Biosample type
27
tissue
15
primary cell
Organ
78
kidney
63
liver
38
brain
36
limb
33
musculature of body
30
heart
22
epithelium
18
ureter
17
vasculature
13
blood vessel
9
connective tissue
7
pancreas
4
artery
4
eye
4
vein
2
adipose tissue
2
nerve
1
spleen
Project
42
AMP
Genome assembly (visualization)
40
GRCh38
32
hg19
Lab
42
AMP-T2D consortium
award.project!
T1D
BIOSAMPLE
ASSAY
42 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
ChIP-seq
tissue
brain
14
frontal cortex
2
Ammon's horn
1
caudate nucleus
1
cerebellar cortex
1
+ See 8 more…
primary cell
endothelial cell of umbilical vein
2
2
astrocyte of the cerebellum
1
2
brain microvascular endothelial cell
1
2
choroid plexus epithelial cell
1
2
astrocyte of the hippocampus
1
+ See 1 more…
See all biosamples
Download