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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
104
ChIP-seq
34
DNase-seq
2
FAIRE-seq
Assay category
104
DNA binding
36
DNA accessibility
Target of assay
101
histone
101
histone modification
63
broad histone mark
38
narrow histone mark
3
RNA binding protein
3
transcription factor
Date released
63
November, 2017
30
June, 2019
25
May, 2019
13
October, 2019
6
October, 2017
2
November, 2018
1
July, 2019
Available data
263
bam
237
bigWig
216
bed narrowPeak
140
bigBed narrowPeak
118
tagAlign
51
bed broadPeak
42
bigBed broadPeak
37
bed bed3+
26
tsv
21
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
2
hic
1
bed bed3
1
bedpe bed3+
1
tagAlign bed3+
1
tar
Organism
140
Homo sapiens
Biosample type
116
tissue
24
primary cell
Organ
358
liver
127
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
140
AMP
Genome assembly (visualization)
138
GRCh38
78
hg19
Lab
140
AMP-T2D consortium
Audit category:
3
missing controlled_by
award.project!
T1D
BIOSAMPLE
ASSAY
140 results
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ChIP-seq
DNase-seq
FAIRE-seq
tissue
brain
6
14
layer of hippocampus
16
caudate nucleus
12
1
temporal lobe
13
angular gyrus
12
+ See 14 more…
primary cell
endothelial cell of umbilical vein
10
2
1
astrocyte of the cerebellum
2
1
brain microvascular endothelial cell
2
1
choroid plexus epithelial cell
2
1
astrocyte of the hippocampus
1
+ See 1 more…
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