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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
WGBS
8
Hi-C
6
RRBS
Assay category
201
Transcription
129
DNA binding
123
DNA accessibility
53
DNA methylation
8
3D chromatin structure
Date released
41
May, 2022
8
July, 2019
6
February, 2021
3
October, 2022
1
March, 2020
1
November, 2019
1
October, 2019
Available data
41
zippedFastqFolder
6
bed bedMethyl
6
bigBed bedMethyl
6
fastq
6
hic
6
tsv
5
bedpe bed3+
3
cool
2
bed bed3+
2
bigWig
2
hdf5
Organism
61
Homo sapiens
Biosample type
60
primary cell
1
cell line
Organ
62
pancreas
61
epithelium
13
heart
12
musculature of body
11
liver
8
connective tissue
8
vasculature
7
blood vessel
6
adipose tissue
5
brain
5
kidney
5
limb
2
spleen
2
vein
1
eye
1
pericardium
Project
50
HPAP
11
AMP
Genome assembly (visualization)
14
hg19
Lab
50
Klaus Kaestner, Upenn
11
AMP-T2D consortium
Audit category:
4
audit script error
2
inconsistent ontology term
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BIOSAMPLE
ASSAY
61 results
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WGBS
Hi-C
RRBS
primary cell
pancreatic alpha cell
31
1
pancreatic beta cell
16
1
endothelial cell of umbilical vein
2
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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cell line
EndoC_BH1
1
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