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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ATAC-seq
Assay category
7
DNA accessibility
Date released
5
February, 2023
2
February, 2021
Available data
2659
bam
2485
bigWig
1672
bed narrowPeak
1174
fastq
1068
tsv
1015
bigBed narrowPeak
350
tagAlign
318
bed broadPeak
282
bigBed broadPeak
242
bed bed3+
158
txt
153
zippedFastqFolder
64
xls
34
bed bedMethyl
34
bigBed bedMethyl
19
hic
16
bedpe bed3+
8
csv
7
bed bed3
5
hdf5
4
tar
3
cool
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
7
Homo sapiens
Biosample type
in vitro differentiated cells
5
tissue
1
cell line
1
primary cell
Organ
4
bone element
4
skeleton
1
brain
1
connective tissue
1
liver
Project
7
AMP
Genome assembly (visualization)
7
hg19
2
GRCh38
Lab
7
AMP-T2D consortium
Audit category:
1
inconsistent replicate
award.project!
community
organ_slims!
adipose tissue
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
7 results
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ATAC-seq
tissue
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
pubis
1
cell line
HepG2
1
primary cell
osteoblast
1
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