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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
5
DNase-seq
3
single cell RNA-seq
Assay category
9
DNA binding
5
DNA accessibility
3
Transcription
Target of assay
6
control
3
RNA binding protein
3
histone
3
histone modification
3
narrow histone mark
3
transcription factor
Date released
9
November, 2017
5
June, 2019
3
July, 2019
Available data
20
bigWig
17
bam
11
bed broadPeak
11
bed narrowPeak
11
bigBed broadPeak
11
bigBed narrowPeak
9
fastq
8
bed bed3+
3
hdf5
3
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
17
Homo sapiens
Biosample type
226
tissue
17
primary cell
Organ
242
epithelium
194
pancreas
36
connective tissue
32
vasculature
31
kidney
27
blood vessel
20
vein
17
brain
13
musculature of body
12
heart
12
liver
4
eye
2
adipose tissue
2
artery
1
pericardium
Project
17
AMP
Genome assembly (visualization)
17
hg19
14
GRCh38
Lab
17
AMP-T2D consortium
award.project!
community
BIOSAMPLE
ASSAY
17 results
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ChIP-seq
DNase-seq
single cell RNA-seq
primary cell
astrocyte of the cerebellum
3
1
brain microvascular endothelial cell
3
1
choroid plexus epithelial cell
3
1
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the hippocampus
1
brain pericyte
1
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