Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1743
ChIP-seq
1292
total RNA-seq
465
ATAC-seq
219
single cell RNA-seq
212
DNase-seq
87
RNA microarray
40
pCHi-C
22
Hi-C
16
WGBS
10
MeRIP-seq
8
snATAC-seq
6
RRBS
5
GRO-seq
5
STARR-seq
4
Capture-C
3
FAIRE-seq
3
snDrop-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
DNAme array
1
MPRA
1
whole genome sequencing assay
Assay category
16
DNA methylation
Date released
July, 2019
9
August, 2017
7
November, 2018
Available data
11
fastq
9
bam
9
bed bedMethyl
9
bigBed bedMethyl
9
bigWig
Organism
16
Homo sapiens
Biosample type
15
tissue
1
cell line
Organ
6
adipose tissue
6
connective tissue
4
liver
4
pancreas
2
spleen
Project
47
HPAP
16
AMP
Genome assembly (visualization)
9
GRCh38
Lab
16
AMP-T2D consortium
month_released!
July, 2019
BIOSAMPLE
ASSAY
16 results
search-icon
table-tab-icon
Clear Filters
WGBS
tissue
adipose tissue
3
liver
3
subcutaneous abdominal adipose tissue
3
body of pancreas
2
pancreas
2
+ See 1 more…
cell line
HepG2
1
See all biosamples
Download