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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
614
ChIP-seq
Assay category
614
DNA binding
Target of assay
614
histone modification
613
histone
320
narrow histone mark
293
broad histone mark
184
control
94
transcription factor
28
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
168
October, 2019
124
August, 2017
89
May, 2019
70
November, 2017
60
April, 2019
35
May, 2024
30
October, 2018
27
May, 2020
October, 2017
6
January, 2019
5
December, 2017
Available data
514
bigWig
512
bed narrowPeak
458
bam
306
bigBed narrowPeak
174
tagAlign
67
fastq
32
bed broadPeak
12
bed bed3+
1
tagAlign bed3+
Organism
608
Homo sapiens
Biosample type
614
tissue
153
primary cell
112
in vitro differentiated cells
36
cell line
2
stem cell
Organ
172
brain
95
heart
71
pancreas
70
liver
54
blood vessel
54
vasculature
49
limb
33
connective tissue
32
adipose tissue
25
musculature of body
24
nerve
20
artery
20
kidney
6
spleen
4
gonad
4
ovary
2
eye
1
lymph node
1
pituitary gland
Project
614
AMP
2
T1D
Genome assembly (visualization)
486
GRCh38
430
hg19
Lab
579
AMP-T2D consortium
35
Patrick T. Ellinor, Broad
Audit category:
2
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
month_released!
October, 2017
BIOSAMPLE
ASSAY
614 results
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Clear Filters
ChIP-seq
tissue
liver
65
islet of Langerhans
49
left cardiac atrium
35
subcutaneous abdominal adipose tissue
31
heart left ventricle
24
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