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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
8
total RNA-seq
5
ATAC-seq
Assay category
70
DNA binding
8
Transcription
5
DNA accessibility
Target of assay
50
histone
50
histone modification
30
broad histone mark
20
narrow histone mark
12
transcription factor
8
control
5
RNA binding protein
Date released
83
May, 2021
Available data
48
bed narrowPeak
40
bigWig
bam
24
fastq
6
txt
2
bed bed3+
Organism
83
Homo sapiens
Biosample type
47
in vitro differentiated cells
35
primary cell
1
tissue
Organ
1
pancreas
Project
83
AMP
56
T1D
Genome assembly (visualization)
40
hg19
Lab
684
AMP-T2D consortium
83
Kyle Gaulton, UCSD
67
Katalin Susztak, Upenn
40
Karen Mohlke, UNC
37
Bing Ren, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
1
Maike Sander, UCSD
files.file_type!
bam
assembly!
GRCh38
BIOSAMPLE
ASSAY
83 results
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ChIP-seq
total RNA-seq
ATAC-seq
in vitro differentiated cells
embryonic stem cell
37
5
5
primary cell
CD8-positive, alpha-beta T cell
33
2
tissue
pancreas
1
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