Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
ChIP-seq
4
WGBS
3
ATAC-seq
2
pCHi-C
2
total RNA-seq
1
RNA microarray
Assay category
36
DNA binding
4
DNA methylation
3
DNA accessibility
2
Transcription
Target of assay
31
histone
31
histone modification
20
broad histone mark
11
narrow histone mark
5
control
Date released
40
August, 2017
2
February, 2020
1
August, 2018
1
August, 2021
1
February, 2023
1
January, 2018
1
March, 2020
1
October, 2019
Available data
21
fastq
bam
8
tagAlign
3
bigWig
3
tsv
2
bed narrowPeak
1
bed broadPeak
1
bedpe bed3+
1
bigBed narrowPeak
Organism
47
Homo sapiens
Biosample type
47
tissue
1
in vitro differentiated cells
Organ
110
liver
107
heart
92
bone element
89
connective tissue
88
kidney
73
pancreas
55
epithelium
54
eye
48
adipose tissue
41
brain
39
musculature of body
16
vasculature
15
blood vessel
8
limb
8
skeleton
5
gonad
5
ovary
4
artery
2
intestine
2
vein
1
adrenal gland
1
blood
1
bodily fluid
1
embryo
1
esophagus
1
large intestine
1
lung
1
lymph node
1
mammary gland
1
nerve
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
48
AMP
Genome assembly (visualization)
5
hg19
GRCh38
Lab
48
AMP-T2D consortium
files.file_type!
bam
assembly!
GRCh38
BIOSAMPLE
ASSAY
48 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
WGBS
ATAC-seq
pCHi-C
total RNA-seq
RNA microarray
tissue
subcutaneous abdominal adipose tissue
36
3
adipose tissue
1
3
1
subcutaneous adipose tissue
1
1
omental fat pad
1
in vitro differentiated cells
white fat cell
1
Download