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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
296
ATAC-seq
293
ChIP-seq
146
total RNA-seq
119
single cell RNA-seq
85
RNA microarray
39
pCHi-C
30
Hi-C
21
RRBS
10
MeRIP-seq
10
WGBS
8
snATAC-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
DNase-seq
3
snDrop-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
DNAme array
1
MPRA
1
whole genome sequencing assay
Assay category
119
Transcription
Date released
106
August, 2021
6
February, 2021
December, 2019
3
May, 2023
1
February, 2023
1
May, 2022
1
November, 2018
1
September, 2018
Available data
209
tsv
bam
106
bigWig
100
fastq
13
txt
8
csv
Organism
119
Homo sapiens
Biosample type
117
tissue
2
primary cell
Organ
93
heart
16
kidney
6
blood vessel
6
vasculature
2
artery
1
liver
1
musculature of body
Project
119
AMP
85
HPAP
47
KPMP
9
LungMap
Lab
108
AMP-T2D consortium
11
Katalin Susztak, Upenn
Audit category:
5
audit script error
files.file_type!
bam
month_released!
December, 2019
BIOSAMPLE
ASSAY
119 results
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single cell RNA-seq
tissue
heart left ventricle
18
left cardiac atrium
18
right cardiac atrium
18
heart right ventricle
17
kidney
16
+ See 12 more…
primary cell
pancreatic cell
2
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