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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ATAC-seq
3
single cell RNA-seq
2
Hi-C
1
total RNA-seq
Assay category
11
DNA accessibility
4
Transcription
2
3D chromatin structure
Date released
270
August, 2021
129
August, 2017
106
February, 2023
105
May, 2021
98
February, 2021
64
October, 2019
58
May, 2020
46
March, 2020
42
May, 2022
40
May, 2024
26
July, 2019
25
February, 2020
15
May, 2023
14
November, 2017
10
November, 2020
8
January, 2018
8
October, 2017
5
December, 2019
4
July, 2018
4
March, 2019
2
November, 2019
1
April, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
October, 2022
1
September, 2018
Available data
bam
37
bed narrowPeak
31
bigWig
20
tsv
2
bedpe bed3+
2
hic
Organism
17
Homo sapiens
Biosample type
16
tissue
1
cell line
Organ
14
kidney
2
pancreas
1
adipose tissue
1
connective tissue
1
epithelium
Project
17
AMP
Genome assembly (visualization)
12
GRCh38
3
hg19
Lab
14
Katalin Susztak, Upenn
3
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
bam
BIOSAMPLE
ASSAY
17 results
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Clear Filters
ATAC-seq
single cell RNA-seq
Hi-C
total RNA-seq
tissue
kidney
11
3
adipose tissue
1
islet of Langerhans
1
cell line
EndoC_BH1
1
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