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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
8
total RNA-seq
Assay category
70
DNA binding
8
Transcription
DNA accessibility
Target of assay
50
histone
50
histone modification
30
broad histone mark
20
narrow histone mark
12
transcription factor
8
control
5
RNA binding protein
Date released
78
May, 2021
Available data
35
bigWig
30
bed narrowPeak
6
bam
fastq
6
txt
2
bed bed3+
Organism
78
Homo sapiens
Biosample type
42
in vitro differentiated cells
35
primary cell
1
tissue
Organ
1
pancreas
Project
207
T1D
78
AMP
Genome assembly (visualization)
35
hg19
Lab
2224
AMP-T2D consortium
78
Kyle Gaulton, UCSD
61
Katalin Susztak, Upenn
40
Patrick T. Ellinor, Broad
37
Bing Ren, UCSD
20
Karen Mohlke, UNC
10
Rohit N. Kulkarni, M.D., Ph.D.
2
Struan F.A. Grant, CHOP
files.file_type!
fastq
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
78 results
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ChIP-seq
total RNA-seq
in vitro differentiated cells
embryonic stem cell
37
5
primary cell
CD8-positive, alpha-beta T cell
33
2
tissue
pancreas
1
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