Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
16
WGBS
11
ATAC-seq
Assay category
35
DNA methylation
11
DNA accessibility
Date released
23
July, 2019
10
February, 2023
6
August, 2017
6
November, 2018
1
February, 2021
Available data
2628
bam
2455
bigWig
1379
tsv
1327
bed narrowPeak
762
fastq
687
bigBed narrowPeak
294
tagAlign
270
bed bed3+
263
bed broadPeak
226
bigBed broadPeak
160
txt
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
18
bedpe bed3+
17
hic
11
bed bed3
8
csv
7
bed bedgraph
4
hdf5
2
ibed
1
bedpe
1
tagAlign bed3+
1
tar
Organism
46
Homo sapiens
Biosample type
30
tissue
11
primary cell
5
in vitro differentiated cells
cell line
Organ
9
connective tissue
8
heart
6
epithelium
6
pancreas
4
bone element
4
kidney
4
musculature of body
4
skeleton
3
brain
2
adipose tissue
2
liver
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
46
AMP
Genome assembly (visualization)
30
hg19
17
GRCh38
Lab
46
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
biosample_type!
cell line
BIOSAMPLE
ASSAY
46 results
search-icon
table-tab-icon
Clear Filters
RRBS
WGBS
ATAC-seq
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
brain
1
1
+ See 15 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 6 more…
in vitro differentiated cells
chondrocyte
5
See all biosamples
Download