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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
DNase-seq
4
ChIP-seq
1
WGBS
Assay category
9
DNA accessibility
4
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
2
broad histone mark
1
RNA binding protein
1
narrow histone mark
1
transcription factor
Date released
6
October, 2019
5
June, 2019
2
November, 2017
1
July, 2019
Available data
180
bam
150
bigWig
129
bed narrowPeak
79
bigBed narrowPeak
68
tsv
13
bed broadPeak
13
bigBed broadPeak
11
bed bed3+
6
tagAlign
3
fastq
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
14
Homo sapiens
Biosample type
8
primary cell
6
tissue
Organ
82
kidney
66
liver
40
brain
38
heart
37
limb
37
musculature of body
28
epithelium
19
vasculature
18
ureter
14
blood vessel
13
pancreas
12
connective tissue
5
eye
4
adipose tissue
4
artery
4
vein
3
spleen
2
nerve
1
pericardium
Project
14
AMP
Genome assembly (visualization)
12
GRCh38
12
hg19
Lab
14
AMP-T2D consortium
BIOSAMPLE
ASSAY
14 results
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DNase-seq
ChIP-seq
WGBS
primary cell
endothelial cell of umbilical vein
2
2
brain microvascular endothelial cell
1
2
kidney capillary endothelial cell
1
tissue
coronary artery
2
tibial artery
2
aorta
1
ascending aorta
1
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