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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
7
WGBS
5
RRBS
Assay category
21
DNA binding
12
DNA methylation
Target of assay
13
histone
13
histone modification
8
broad histone mark
5
narrow histone mark
4
control
4
transcription factor
Date released
17
August, 2017
10
July, 2019
6
February, 2021
Available data
292
bigWig
268
bam
251
bed narrowPeak
176
tsv
141
bigBed narrowPeak
76
bed broadPeak
64
bed bed3+
63
bigBed broadPeak
21
tagAlign
12
bed bedMethyl
12
bigBed bedMethyl
5
bedpe bed3+
5
hic
2
fastq
1
txt
Organism
33
Homo sapiens
Biosample type
25
tissue
6
cell line
2
primary cell
Organ
120
brain
89
liver
25
connective tissue
25
pancreas
19
musculature of body
14
heart
13
epithelium
10
adipose tissue
8
vasculature
7
blood vessel
6
artery
4
kidney
2
spleen
1
eye
1
limb
1
pericardium
1
pituitary gland
Project
33
AMP
Genome assembly (visualization)
22
hg19
11
GRCh38
Lab
33
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
33 results
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ChIP-seq
WGBS
RRBS
tissue
skeletal muscle tissue
15
2
heart left ventricle
2
1
heart right ventricle
2
heart
1
muscle of leg
1
+ See 1 more…
cell line
smooth muscle cell of the coronary artery
6
primary cell
cardiac fibroblast
1
skeletal muscle cell
1
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