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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
200
DNase-seq
18
ChIP-seq
Assay category
200
DNA accessibility
18
DNA binding
Target of assay
14
histone
14
histone modification
8
narrow histone mark
6
broad histone mark
4
RNA binding protein
4
transcription factor
1
chromatin remodeller
Date released
185
June, 2019
13
August, 2017
7
October, 2019
6
November, 2017
6
November, 2018
1
November, 2020
Available data
2242
bam
2206
bigWig
1177
bed narrowPeak
1140
tsv
672
bigBed narrowPeak
598
fastq
247
bed bed3+
233
bed broadPeak
218
bigBed broadPeak
131
tagAlign
64
xls
16
bed bedMethyl
16
bigBed bedMethyl
1
bed bed3
1
hdf5
1
tagAlign bed3+
Organism
218
Homo sapiens
Biosample type
173
tissue
43
primary cell
1
cell line
1
in vitro differentiated cells
Organ
78
kidney
liver
38
brain
36
limb
33
musculature of body
30
heart
20
epithelium
18
ureter
15
vasculature
11
blood vessel
9
connective tissue
7
pancreas
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
218
AMP
Genome assembly (visualization)
218
GRCh38
199
hg19
Lab
218
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
1
inconsistent assembly
organ_slims!
liver
BIOSAMPLE
ASSAY
218 results
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Clear Filters
DNase-seq
ChIP-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 37 more…
primary cell
skeletal muscle myoblast
12
astrocyte of the cerebellum
1
2
brain microvascular endothelial cell
1
2
cardiac fibroblast
3
choroid plexus epithelial cell
1
2
+ See 16 more…
cell line
Panc1
1
in vitro differentiated cells
adipocyte
1
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