Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
43
ATAC-seq
34
total RNA-seq
Assay category
70
DNA binding
43
DNA accessibility
34
Transcription
Target of assay
50
histone
50
histone modification
30
broad histone mark
20
narrow histone mark
12
transcription factor
8
control
5
RNA binding protein
Date released
83
May, 2021
64
May, 2022
Available data
68
bed narrowPeak
60
bigWig
24
bam
24
fastq
6
txt
2
bed bed3+
Organism
147
Homo sapiens
Biosample type
65
tissue
47
in vitro differentiated cells
35
primary cell
Organ
40
liver
25
pancreas
Project
236
T1D
147
AMP
Genome assembly (visualization)
78
hg19
Lab
3904
AMP-T2D consortium
142
Katalin Susztak, Upenn
107
Kyle Gaulton, UCSD
40
Karen Mohlke, UNC
38
Bing Ren, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
1
Stephen Parker, UMich
BIOSAMPLE
ASSAY
147 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
tissue
liver
20
20
islet of Langerhans
18
6
pancreas
1
in vitro differentiated cells
embryonic stem cell
37
5
5
primary cell
CD8-positive, alpha-beta T cell
33
2
Download