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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
199
DNase-seq
19
ChIP-seq
Assay category
199
DNA accessibility
19
DNA binding
Target of assay
14
histone
14
histone modification
8
narrow histone mark
6
broad histone mark
5
RNA binding protein
5
transcription factor
1
chromatin remodeller
Date released
187
June, 2019
15
August, 2017
9
November, 2018
October, 2019
6
November, 2017
1
November, 2020
Available data
2407
bam
2268
bigWig
1367
tsv
1153
bed narrowPeak
762
fastq
625
bigBed narrowPeak
264
bed bed3+
255
bed broadPeak
245
tagAlign
218
bigBed broadPeak
160
txt
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
15
bedpe bed3+
13
hic
11
bed bed3
8
csv
7
bed bedgraph
4
hdf5
2
ibed
1
bedpe
Organism
218
Homo sapiens
Biosample type
172
tissue
cell line
45
primary cell
1
in vitro differentiated cells
Organ
78
kidney
38
brain
33
musculature of body
32
limb
30
heart
18
epithelium
18
ureter
11
vasculature
9
connective tissue
7
blood vessel
6
pancreas
5
liver
4
eye
2
adipose tissue
2
artery
1
spleen
Project
218
AMP
Genome assembly (visualization)
216
GRCh38
195
hg19
Lab
218
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
1
inconsistent assembly
month_released!
October, 2019
biosample_type!
cell line
BIOSAMPLE
ASSAY
218 results
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Clear Filters
DNase-seq
ChIP-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 37 more…
primary cell
skeletal muscle myoblast
1
13
astrocyte of the cerebellum
1
2
brain microvascular endothelial cell
1
2
cardiac fibroblast
3
choroid plexus epithelial cell
1
2
+ See 17 more…
in vitro differentiated cells
adipocyte
1
See all biosamples
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