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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
ChIP-seq
26
ATAC-seq
20
total RNA-seq
2
Hi-C
Assay category
93
DNA binding
26
DNA accessibility
20
Transcription
2
3D chromatin structure
Target of assay
70
histone
70
histone modification
43
broad histone mark
27
narrow histone mark
16
control
7
transcription factor
5
RNA binding protein
Date released
670
February, 2021
411
August, 2017
406
November, 2017
319
August, 2021
314
October, 2019
296
May, 2020
246
May, 2021
218
June, 2019
168
July, 2018
120
May, 2019
108
July, 2019
106
February, 2023
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
66
May, 2022
61
November, 2019
57
March, 2020
49
April, 2018
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
5
March, 2019
4
August, 2018
3
June, 2018
1
August, 2022
1
October, 2022
Available data
138
bam
102
bed narrowPeak
96
bigWig
64
bigBed narrowPeak
20
tsv
2
bedpe bed3+
2
hic
Organism
141
Homo sapiens
Biosample type
120
tissue
16
cell line
5
in vitro differentiated cells
Organ
57
heart
55
pancreas
23
kidney
16
epithelium
1
adipose tissue
1
connective tissue
Project
141
AMP
Genome assembly (visualization)
124
hg19
121
GRCh38
Lab
141
AMP-T2D consortium
Audit category:
22
inconsistent ontology term
BIOSAMPLE
ASSAY
141 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
tissue
islet of Langerhans
19
19
1
heart left ventricle
35
kidney
23
heart right ventricle
13
heart
9
+ See 1 more…
cell line
EndoC_BH1
13
1
1
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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