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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ATAC-seq
10
DNase-seq
1
FAIRE-seq
Assay category
242
DNA binding
33
DNA accessibility
30
Transcription
5
3D chromatin structure
Date released
187
June, 2019
100
May, 2020
88
February, 2023
82
August, 2021
39
May, 2022
34
May, 2021
33
October, 2019
26
November, 2019
14
February, 2021
14
September, 2018
11
August, 2017
11
May, 2023
10
November, 2018
8
July, 2019
8
October, 2017
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
2
November, 2020
1
August, 2022
Available data
15
bam
15
bed narrowPeak
14
bigWig
12
bigBed narrowPeak
7
bed bed3+
7
bed broadPeak
7
bigBed broadPeak
1
tar
Organism
33
Homo sapiens
Biosample type
20
tissue
7
primary cell
4
in vitro differentiated cells
2
cell line
Organ
7
epithelium
6
blood vessel
6
limb
6
vasculature
4
pancreas
3
artery
3
connective tissue
3
kidney
3
nerve
3
vein
1
adipose tissue
1
brain
1
eye
1
liver
1
pituitary gland
1
skin of body
Project
33
AMP
Genome assembly (visualization)
18
hg19
14
GRCh38
Lab
33
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
organ_slims!
skeleton
BIOSAMPLE
ASSAY
33 results
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ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
13
tibial artery
1
2
tibial nerve
1
2
adipose tissue
1
primary cell
endothelial cell of umbilical vein
2
1
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
in vitro differentiated cells
adipocyte
2
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
cell line
Panc1
1
glomerular visceral epithelial cell
1
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