Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
566
ChIP-seq
210
ATAC-seq
149
total RNA-seq
122
single cell RNA-seq
87
RNA microarray
35
pCHi-C
28
WGBS
26
DNase-seq
10
MeRIP-seq
7
snATAC-seq
6
Hi-C
5
GRO-seq
5
STARR-seq
3
snDrop-seq
2
Capture-C
2
RRBS
1
CRISPR genome editing followed by sgRNA sequencing
1
DNAme array
1
MPRA
1
whole genome sequencing assay
Assay category
26
DNA accessibility
Date released
23
June, 2019
2
October, 2019
1
August, 2017
Available data
23
bam
23
bed bed3+
23
bed broadPeak
23
bed narrowPeak
23
bigBed broadPeak
23
bigBed narrowPeak
23
bigWig
Organism
26
Homo sapiens
Biosample type
17
tissue
9
primary cell
Organ
10
brain
9
kidney
8
epithelium
3
heart
2
pancreas
1
blood vessel
1
connective tissue
1
liver
1
vasculature
Project
26
AMP
Genome assembly (visualization)
207
GRCh38
hg19
Lab
26
AMP-T2D consortium
organ_slims!
small intestine
assembly!
hg19
BIOSAMPLE
ASSAY
26 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
tissue
body of pancreas
2
heart
2
Ammon's horn
1
caudate nucleus
1
cerebellar cortex
1
+ See 10 more…
primary cell
kidney tubule cell
3
glomerular visceral epithelial cell
2
kidney glomerular epithelial cell
2
cardiac fibroblast
1
kidney capillary endothelial cell
1
See all biosamples
Download