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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
ChIP-seq
1
ATAC-seq
1
RRBS
1
total RNA-seq
Assay category
60
DNA binding
1
DNA accessibility
1
DNA methylation
1
Transcription
Target of assay
51
transcription factor
10
RNA binding protein
10
chromatin remodeller
6
control
1
histone
1
histone modification
1
narrow histone mark
Date released
27
December, 2018
18
January, 2019
15
November, 2018
2
July, 2019
1
January, 2018
Available data
61
bam
60
fastq
56
bigWig
54
bed narrowPeak
54
bigBed narrowPeak
1
bed bedMethyl
1
bigBed bedMethyl
1
tsv
Organism
63
Homo sapiens
Biosample type
61
cell line
1
primary cell
1
tissue
Organ
791
liver
760
pancreas
683
connective tissue
491
adipose tissue
393
heart
368
epithelium
307
kidney
286
brain
236
vasculature
230
blood vessel
158
bone element
141
artery
122
limb
96
musculature of body
61
blood
61
bodily fluid
61
eye
43
nerve
37
embryo
25
spleen
22
vein
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
1
adrenal gland
1
esophagus
1
large intestine
1
lung
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
63
AMP
8
T1D
Genome assembly (visualization)
57
hg19
55
GRCh38
Lab
63
AMP-T2D consortium
Audit category:
1
inconsistent control
BIOSAMPLE
ASSAY
63 results
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Clear Filters
ChIP-seq
ATAC-seq
RRBS
total RNA-seq
cell line
GM12878
60
1
primary cell
pericardium fibroblast
1
tissue
pericardium
1
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