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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
5
total RNA-seq
2
DNase-seq
1
ATAC-seq
Assay category
19
DNA binding
5
Transcription
3
DNA accessibility
Target of assay
24
histone
24
histone modification
broad histone mark
11
control
8
narrow histone mark
Date released
26
October, 2019
1
February, 2020
Available data
26
bam
15
bigWig
11
bed narrowPeak
10
bigBed narrowPeak
5
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
27
Homo sapiens
Biosample type
27
tissue
Organ
749
liver
682
pancreas
639
connective tissue
471
adipose tissue
336
heart
324
epithelium
292
kidney
216
brain
191
vasculature
185
blood vessel
158
bone element
127
artery
88
limb
76
musculature of body
61
blood
61
bodily fluid
61
eye
33
embryo
27
nerve
21
spleen
18
ureter
16
skeleton
13
vein
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
1
adrenal gland
1
esophagus
1
large intestine
1
lung
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
27
AMP
Genome assembly (visualization)
15
GRCh38
15
hg19
Lab
27
AMP-T2D consortium
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
27 results
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ChIP-seq
total RNA-seq
DNase-seq
ATAC-seq
tissue
tibial nerve
19
5
2
1
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