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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
total RNA-seq
17
ChIP-seq
14
ATAC-seq
4
single cell RNA-seq
Assay category
30
Transcription
17
DNA binding
14
DNA accessibility
Target of assay
32
histone
32
histone modification
17
broad histone mark
narrow histone mark
Date released
670
February, 2021
368
November, 2017
323
August, 2017
308
August, 2021
269
May, 2020
223
May, 2021
207
June, 2019
173
October, 2019
168
July, 2018
108
July, 2019
106
February, 2023
88
November, 2018
86
May, 2019
78
December, 2017
66
May, 2022
65
October, 2018
58
September, 2018
57
April, 2019
57
March, 2020
57
November, 2019
49
April, 2018
35
December, 2018
31
February, 2018
27
January, 2019
25
February, 2020
25
May, 2024
21
October, 2017
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
5
March, 2019
4
August, 2018
3
June, 2018
1
August, 2022
1
October, 2022
Available data
61
fastq
60
bam
60
bigWig
31
bed narrowPeak
29
tsv
14
bigBed narrowPeak
1
csv
Organism
61
Homo sapiens
Biosample type
61
primary cell
Organ
58
pancreas
51
epithelium
Project
61
AMP
Genome assembly (visualization)
60
GRCh38
60
hg19
Lab
61
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
17
missing controlled_by
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
61 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
4
6
4
1
pancreatic beta cell
10
4
pancreatic alpha cell
10
3
pancreatic acinar cell
2
4
3
pancreatic endocrine cell
7
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