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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
85
single cell RNA-seq
49
ATAC-seq
48
snATAC-seq
47
WGBS
3
Hi-C
Assay category
177
Transcription
97
DNA accessibility
47
DNA methylation
3
3D chromatin structure
Date released
134
May, 2022
76
February, 2023
59
September, 2020
45
February, 2021
7
August, 2020
3
October, 2022
Available data
169
fastq
153
zippedFastqFolder
10
bigWig
6
tsv
3
bedpe bed3+
3
cool
3
hic
Organism
324
Homo sapiens
Biosample type
324
primary cell
Organ
152
epithelium
152
pancreas
Project
4292
AMP
324
HPAP
244
T1D
47
KPMP
19
LungMap
4
community
1
ITG
Genome assembly (visualization)
10
GRCh38
3
hg19
Lab
324
Klaus Kaestner, Upenn
Audit category:
30
audit script error
BIOSAMPLE
ASSAY
324 results
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total RNA-seq
single cell RNA-seq
ATAC-seq
snATAC-seq
WGBS
Hi-C
primary cell
Langerhans cell
85
48
pancreatic alpha cell
42
29
31
1
pancreatic beta cell
11
16
16
1
exocrine cell
39
pancreatic acinar cell
4
1
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