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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
94
single cell RNA-seq
92
total RNA-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
190
Transcription
107
DNA accessibility
47
DNA methylation
3
3D chromatin structure
Date released
76
February, 2023
56
September, 2020
33
May, 2022
12
February, 2021
9
April, 2020
4
March, 2023
Available data
126
fastq
52
zippedFastqFolder
Organism
186
Homo sapiens
Biosample type
177
primary cell
9
tissue
2
cell line
2
stem cell
Organ
53
epithelium
53
pancreas
9
lung
Project
1576
AMP
177
HPAP
105
T1D
47
KPMP
9
LungMap
4
community
Lab
177
Klaus Kaestner, Upenn
9
Xin Sun, UCSD
4
Anna Gloyn, Oxford
BIOSAMPLE
ASSAY
190 results
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single cell RNA-seq
total RNA-seq
CRISPR RNA-seq
CRISPRi RNA-seq
shRNA RNA-seq
siRNA RNA-seq
primary cell
Langerhans cell
85
pancreatic alpha cell
42
exocrine cell
39
pancreatic beta cell
11
tissue
lung
9
cell line
EndoC-BH1
1
1
stem cell
SB Ad3.1
1
1
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