Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
85
single cell RNA-seq
49
ATAC-seq
snATAC-seq
47
WGBS
3
Hi-C
Assay category
85
Transcription
49
DNA accessibility
47
DNA methylation
3
3D chromatin structure
Date released
113
May, 2022
43
September, 2020
18
February, 2021
7
August, 2020
3
October, 2022
Available data
132
zippedFastqFolder
50
fastq
10
bigWig
6
tsv
3
bedpe bed3+
3
cool
3
hic
Organism
184
Homo sapiens
Biosample type
184
primary cell
Organ
99
epithelium
99
pancreas
Project
2908
AMP
184
HPAP
121
T1D
47
KPMP
9
LungMap
4
community
1
ITG
Genome assembly (visualization)
10
GRCh38
3
hg19
Lab
184
Klaus Kaestner, Upenn
Audit category:
3
audit script error
assay_title!
snATAC-seq
total RNA-seq
BIOSAMPLE
ASSAY
184 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
ATAC-seq
WGBS
Hi-C
primary cell
Langerhans cell
85
pancreatic alpha cell
29
31
1
pancreatic beta cell
16
16
1
pancreatic acinar cell
4
1
Download