Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
85
single cell RNA-seq
48
snATAC-seq
42
ATAC-seq
3
Hi-C
Assay category
177
Transcription
90
DNA accessibility
DNA methylation
3
3D chromatin structure
Date released
93
May, 2022
76
February, 2023
59
September, 2020
39
February, 2021
August, 2020
3
October, 2022
Available data
156
fastq
112
zippedFastqFolder
3
bedpe bed3+
3
bigWig
3
cool
3
hic
Organism
270
Homo sapiens
Biosample type
270
primary cell
Organ
98
epithelium
98
pancreas
Project
4202
AMP
270
HPAP
244
T1D
47
KPMP
19
LungMap
4
community
1
ITG
Genome assembly (visualization)
3
GRCh38
3
hg19
Lab
270
Klaus Kaestner, Upenn
Audit category:
30
audit script error
month_released!
August, 2020
assay_slims!
DNA methylation
BIOSAMPLE
ASSAY
270 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
snATAC-seq
ATAC-seq
Hi-C
primary cell
Langerhans cell
85
48
pancreatic alpha cell
42
24
1
exocrine cell
39
pancreatic beta cell
11
14
1
pancreatic acinar cell
4
1
Download