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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
33
single cell RNA-seq
27
snATAC-seq
6
WGBS
3
ATAC-seq
3
Hi-C
Assay category
125
Transcription
30
DNA accessibility
6
DNA methylation
3
3D chromatin structure
Date released
76
February, 2023
45
February, 2021
40
September, 2020
August, 2020
3
October, 2022
Available data
162
fastq
zippedFastqFolder
6
tsv
3
bedpe bed3+
3
bigWig
3
cool
3
hic
Organism
164
Homo sapiens
Biosample type
164
primary cell
Organ
65
epithelium
65
pancreas
Project
4252
AMP
244
T1D
164
HPAP
47
KPMP
19
LungMap
4
community
1
ITG
Genome assembly (visualization)
3
GRCh38
3
hg19
Lab
164
Klaus Kaestner, Upenn
Audit category:
30
audit script error
month_released!
August, 2020
files.file_type!
zippedFastqFolder
BIOSAMPLE
ASSAY
164 results
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total RNA-seq
single cell RNA-seq
snATAC-seq
WGBS
ATAC-seq
Hi-C
primary cell
Langerhans cell
33
27
pancreatic alpha cell
42
6
2
1
exocrine cell
39
pancreatic beta cell
11
1
1
pancreatic acinar cell
1
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