Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
98
total RNA-seq
88
ChIP-seq
1
Hi-C
Assay category
98
Transcription
88
DNA binding
1
3D chromatin structure
Target of assay
88
histone
88
histone modification
44
broad histone mark
44
narrow histone mark
Date released
136
May, 2021
45
May, 2020
5
March, 2020
1
March, 2023
Available data
186
bam
186
bigWig
98
tsv
88
bed narrowPeak
84
tagAlign
1
hic
Organism
187
Homo sapiens
Biosample type
181
primary cell
4
cell line
2
tissue
Organ
6
pancreas
4
epithelium
Project
2890
AMP
186
T1D
10
HPAP
1
ITG
Genome assembly (visualization)
187
GRCh38
186
hg19
Lab
180
Kyle Gaulton, UCSD
6
AMP-T2D consortium
1
ITG
Audit category:
8
inconsistent ontology term
BIOSAMPLE
ASSAY
187 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
Hi-C
primary cell
monocyte
53
84
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
+ See 21 more…
cell line
EndoC_BH1
2
2
tissue
islet of Langerhans
2
See all biosamples
Download