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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
snATAC-seq
17
pCHi-C
11
ATAC-seq
7
total RNA-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
Assay category
11
DNA accessibility
7
Transcription
Date released
21
February, 2023
17
May, 2021
2
March, 2020
Available data
bam
186
bigWig
98
tsv
88
bed narrowPeak
84
tagAlign
Organism
40
Homo sapiens
Biosample type
19
tissue
16
primary cell
5
cell line
Organ
18
pancreas
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
1038
AMP
276
HPAP
47
KPMP
40
T1D
9
LungMap
4
community
1
ITG
Lab
38
Kyle Gaulton, UCSD
2
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
bam
assay_title!
snATAC-seq
BIOSAMPLE
ASSAY
40 results
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pCHi-C
ATAC-seq
total RNA-seq
CRISPR genome editing followed by DNA sequencing
HiChIP
tissue
islet of Langerhans
11
7
thymus
1
primary cell
CD4-positive, alpha-beta T cell
2
B cell
1
CD8-positive, alpha-beta T cell
1
activated CD4-positive, alpha-beta T cell
1
adult endothelial progenitor cell
1
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cell line
EndoC_BH1
3
2
See all biosamples
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