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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
96
total RNA-seq
84
ChIP-seq
17
pCHi-C
16
snATAC-seq
Assay category
96
Transcription
84
DNA binding
16
DNA accessibility
Target of assay
84
histone
84
histone modification
44
broad histone mark
40
narrow histone mark
Date released
152
May, 2021
45
May, 2020
February, 2023
16
January, 2021
Available data
180
bam
180
bigWig
96
tsv
84
bed narrowPeak
84
tagAlign
Organism
213
Homo sapiens
Biosample type
204
primary cell
9
tissue
Organ
8
blood
8
bodily fluid
8
pancreas
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
213
T1D
107
AMP
Genome assembly (visualization)
180
GRCh38
180
hg19
Lab
213
Kyle Gaulton, UCSD
8
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
month_released!
February, 2023
BIOSAMPLE
ASSAY
213 results
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total RNA-seq
ChIP-seq
pCHi-C
snATAC-seq
primary cell
monocyte
53
84
1
peripheral blood mononuclear cell
8
B cell
2
1
CD8-positive, alpha-beta T cell
2
1
naive B cel
2
1
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tissue
islet of Langerhans
4
pancreas
4
thymus
1
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