Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
snATAC-seq
16
pCHi-C
11
ATAC-seq
7
total RNA-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
Assay category
29
DNA accessibility
7
Transcription
Date released
23
February, 2023
16
January, 2021
16
May, 2021
2
March, 2020
Organism
57
Homo sapiens
Biosample type
28
tissue
24
primary cell
5
cell line
Organ
28
pancreas
8
blood
8
bodily fluid
1
bone element
1
bone marrow
1
connective tissue
thymus
Project
1361
AMP
314
HPAP
57
T1D
47
KPMP
19
LungMap
4
community
Genome assembly (visualization)
GRCh38
186
hg19
Lab
55
Kyle Gaulton, UCSD
2
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
thymus
assembly!
GRCh38
BIOSAMPLE
ASSAY
57 results
search-icon
table-tab-icon
Clear Filters
snATAC-seq
pCHi-C
ATAC-seq
total RNA-seq
CRISPR genome editing followed by DNA sequencing
HiChIP
tissue
islet of Langerhans
6
11
7
pancreas
4
primary cell
peripheral blood mononuclear cell
8
CD4-positive, alpha-beta T cell
2
B cell
1
CD8-positive, alpha-beta T cell
1
activated CD4-positive, alpha-beta T cell
1
+ See 11 more…
cell line
EndoC_BH1
3
2
See all biosamples