Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
117
ChIP-seq
9
total RNA-seq
2
Hi-C
2
STARR-seq
2
pCHi-C
1
whole genome sequencing assay
Assay category
117
DNA binding
Target of assay
60
control
52
transcription factor
7
RNA binding protein
5
histone
5
histone modification
3
narrow histone mark
2
broad histone mark
2
chromatin remodeller
1
recombinant protein
Date released
98
November, 2017
18
August, 2021
1
November, 2018
Available data
99
fastq
98
bam
65
bigWig
46
bed narrowPeak
32
bigBed narrowPeak
14
bed broadPeak
14
bigBed broadPeak
3
tagAlign
3
tar
Organism
117
Homo sapiens
Biosample type
117
cell line
Organ
117
liver
Project
117
AMP
Genome assembly (visualization)
322
hg19
GRCh38
Lab
99
AMP-T2D consortium
18
Bing Ren, UCSD
Audit category:
8
missing controlled_by
Audit category:
4
inconsistent control read length
2
inconsistent control run_type
assembly!
GRCh38
BIOSAMPLE
ASSAY
117 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
117
Download