Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
322
ChIP-seq
5
total RNA-seq
1
ATAC-seq
1
Hi-C
1
pCHi-C
Assay category
322
DNA binding
Target of assay
288
transcription factor
78
recombinant protein
51
RNA binding protein
20
chromatin remodeller
18
histone
18
histone modification
13
control
9
broad histone mark
9
narrow histone mark
2
other context
2
other post-translational modification
Date released
266
November, 2017
42
November, 2018
14
August, 2021
Available data
322
bigWig
308
bam
308
fastq
303
bed narrowPeak
289
bigBed narrowPeak
58
bed broadPeak
58
bigBed broadPeak
12
tagAlign
3
tar
Organism
322
Homo sapiens
Biosample type
322
cell line
Organ
322
liver
Project
322
AMP
Genome assembly (visualization)
322
hg19
261
GRCh38
Lab
308
AMP-T2D consortium
14
Bing Ren, UCSD
Audit category:
12
missing controlled_by
Audit category:
26
inconsistent control read length
8
inconsistent control run_type
BIOSAMPLE
ASSAY
322 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
322
Download